Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AL390955.1-201ENST00000428694 934 ntBASIC16.84■□□□□ 0.29
NIPAL3Q6P499 TSPY15P-201ENST00000457163 923 ntBASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
NIPAL3Q6P499 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NIPAL3Q6P499 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NIPAL3Q6P499 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NIPAL3Q6P499 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NIPAL3Q6P499 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NIPAL3Q6P499 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 AC067852.2-201ENST00000590513 2313 ntBASIC16.83■□□□□ 0.28
NIPAL3Q6P499 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 BCL2-203ENST00000589955 5011 ntBASIC16.83■□□□□ 0.28
NIPAL3Q6P499 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NIPAL3Q6P499 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 AP005242.2-201ENST00000580065 1175 ntBASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 AP000997.3-201ENST00000623333 2250 ntBASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms