Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIST2H2AA3Q6FI13 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 AC104581.1-202ENST00000635932 2618 ntBASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 AC009113.1-201ENST00000570267 2443 ntBASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 TSPY15P-201ENST00000457163 923 ntBASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 MIR4674-201ENST00000582457 87 ntBASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 AC036111.1-201ENST00000533973 1582 ntBASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIST2H2AA3Q6FI13 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 AL512604.3-201ENST00000569583 964 ntBASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 WWOX-216ENST00000569818 525 ntBASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 KRT8P7-201ENST00000533003 1432 ntBASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HIST2H2AA3Q6FI13 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 CYP2D8P-201ENST00000433633 1490 ntBASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 CR769767.2-201ENST00000622735 460 ntBASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HIST2H2AA3Q6FI13 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIST2H2AA3Q6FI13 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms