Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 EGLN1P1-201ENST00000531623 762 ntBASIC21.03■□□□□ 0.96
LONRF3Q496Y0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LONRF3Q496Y0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 KRT8P45-201ENST00000414328 1447 ntBASIC21.02■□□□□ 0.96
LONRF3Q496Y0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LONRF3Q496Y0 AC008556.1-201ENST00000610908 2040 ntBASIC21.02■□□□□ 0.96
LONRF3Q496Y0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
LONRF3Q496Y0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LONRF3Q496Y0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 FAM87A-204ENST00000613235 858 ntBASIC21.01■□□□□ 0.95
LONRF3Q496Y0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LONRF3Q496Y0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 AC135776.1-201ENST00000319817 2481 ntBASIC21■□□□□ 0.95
LONRF3Q496Y0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LONRF3Q496Y0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
LONRF3Q496Y0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LONRF3Q496Y0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21■□□□□ 0.95
LONRF3Q496Y0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
LONRF3Q496Y0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21■□□□□ 0.95
LONRF3Q496Y0 AC112777.1-201ENST00000540175 1423 ntBASIC21■□□□□ 0.95
LONRF3Q496Y0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
LONRF3Q496Y0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
LONRF3Q496Y0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21■□□□□ 0.95
LONRF3Q496Y0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LONRF3Q496Y0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21■□□□□ 0.95
LONRF3Q496Y0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21■□□□□ 0.95
LONRF3Q496Y0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.99■□□□□ 0.95
LONRF3Q496Y0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 AC068880.1-201ENST00000507289 2297 ntBASIC20.99■□□□□ 0.95
LONRF3Q496Y0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 AL109659.2-201ENST00000606809 1674 ntBASIC20.99■□□□□ 0.95
LONRF3Q496Y0 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.99■□□□□ 0.95
LONRF3Q496Y0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms