Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HMGXB3Q12766 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HMGXB3Q12766 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HMGXB3Q12766 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
HMGXB3Q12766 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC32.4■■■□□ 2.78
HMGXB3Q12766 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
HMGXB3Q12766 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
HMGXB3Q12766 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
HMGXB3Q12766 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
HMGXB3Q12766 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC32.39■■■□□ 2.78
HMGXB3Q12766 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
HMGXB3Q12766 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
HMGXB3Q12766 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
HMGXB3Q12766 AC027612.4-201ENST00000605371 583 ntBASIC32.38■■■□□ 2.77
HMGXB3Q12766 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC32.38■■■□□ 2.77
HMGXB3Q12766 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
HMGXB3Q12766 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGXB3Q12766 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 SOD2-201ENST00000337404 991 ntTSL 2 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 AC108751.1-201ENST00000490852 363 ntBASIC32.37■■■□□ 2.77
HMGXB3Q12766 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC32.37■■■□□ 2.77
HMGXB3Q12766 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
HMGXB3Q12766 AC079776.2-201ENST00000641154 1609 ntBASIC32.37■■■□□ 2.77
HMGXB3Q12766 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 NFYC-AS1-201ENST00000606277 1687 ntBASIC32.36■■■□□ 2.77
HMGXB3Q12766 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGXB3Q12766 FAM8A3P-201ENST00000427218 844 ntBASIC32.36■■■□□ 2.77
HMGXB3Q12766 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 CFL1-202ENST00000524553 860 ntTSL 2 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 SPCS2P1-201ENST00000561636 679 ntBASIC32.36■■■□□ 2.77
HMGXB3Q12766 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC32.36■■■□□ 2.77
HMGXB3Q12766 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 AL596442.2-201ENST00000610240 980 ntBASIC32.35■■■□□ 2.77
HMGXB3Q12766 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 AP000867.4-201ENST00000641616 219 ntBASIC32.35■■■□□ 2.77
HMGXB3Q12766 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC32.35■■■□□ 2.77
HMGXB3Q12766 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
HMGXB3Q12766 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC32.34■■■□□ 2.77
HMGXB3Q12766 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC32.34■■■□□ 2.77
HMGXB3Q12766 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC32.34■■■□□ 2.77
HMGXB3Q12766 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
HMGXB3Q12766 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms