Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.36■□□□□ 0.69
CBX1P83916 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CBX1P83916 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CBX1P83916 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CBX1P83916 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX1P83916 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CBX1P83916 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CBX1P83916 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX1P83916 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 POU5F1P4-201ENST00000413175 1085 ntBASIC19.35■□□□□ 0.69
CBX1P83916 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.35■□□□□ 0.69
CBX1P83916 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX1P83916 AC008175.2-201ENST00000612840 297 ntBASIC19.35■□□□□ 0.69
CBX1P83916 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX1P83916 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CBX1P83916 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
CBX1P83916 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX1P83916 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CBX1P83916 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CBX1P83916 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.34■□□□□ 0.69
CBX1P83916 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.34■□□□□ 0.69
CBX1P83916 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CBX1P83916 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CBX1P83916 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CBX1P83916 FEM1AP3-201ENST00000403722 1741 ntBASIC19.34■□□□□ 0.69
CBX1P83916 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.33■□□□□ 0.69
CBX1P83916 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CBX1P83916 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.33■□□□□ 0.69
CBX1P83916 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 AL499627.1-201ENST00000569373 2188 ntBASIC19.33■□□□□ 0.69
CBX1P83916 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.33■□□□□ 0.69
CBX1P83916 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CBX1P83916 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CBX1P83916 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX1P83916 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.33■□□□□ 0.69
CBX1P83916 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.33■□□□□ 0.68
CBX1P83916 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.68
CBX1P83916 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CBX1P83916 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.33■□□□□ 0.68
CBX1P83916 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX1P83916 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.33■□□□□ 0.68
CBX1P83916 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.33■□□□□ 0.68
CBX1P83916 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CBX1P83916 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms