Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.7■□□□□ 0.26
RPS4XP62701 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.7■□□□□ 0.26
RPS4XP62701 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.7■□□□□ 0.26
RPS4XP62701 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS4XP62701 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS4XP62701 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RPS4XP62701 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 AC034236.2-201ENST00000606662 1610 ntBASIC16.7■□□□□ 0.26
RPS4XP62701 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPS4XP62701 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4XP62701 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPS4XP62701 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4XP62701 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RPS4XP62701 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4XP62701 AC128688.1-201ENST00000487626 519 ntBASIC16.69■□□□□ 0.26
RPS4XP62701 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
RPS4XP62701 MIR4674-201ENST00000582457 87 ntBASIC16.69■□□□□ 0.26
RPS4XP62701 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4XP62701 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPS4XP62701 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.69■□□□□ 0.26
RPS4XP62701 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPS4XP62701 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.69■□□□□ 0.26
RPS4XP62701 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPS4XP62701 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4XP62701 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 CRYGFP-201ENST00000418459 633 ntBASIC16.68■□□□□ 0.26
RPS4XP62701 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4XP62701 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 EGLN1P1-201ENST00000531623 762 ntBASIC16.68■□□□□ 0.26
RPS4XP62701 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS4XP62701 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.68■□□□□ 0.26
RPS4XP62701 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
RPS4XP62701 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RPS4XP62701 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 KRT8P50-201ENST00000562022 1438 ntBASIC16.68■□□□□ 0.26
RPS4XP62701 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPS4XP62701 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPS4XP62701 AC138932.1-201ENST00000534164 6830 ntBASIC16.67■□□□□ 0.26
RPS4XP62701 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4XP62701 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
RPS4XP62701 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPS4XP62701 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4XP62701 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms