Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.18■□□□□ 0.18
SEC61A1P61619 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.18■□□□□ 0.18
SEC61A1P61619 AP000525.1-201ENST00000608286 694 ntBASIC16.18■□□□□ 0.18
SEC61A1P61619 AL445675.2-201ENST00000620291 557 ntBASIC16.18■□□□□ 0.18
SEC61A1P61619 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.18■□□□□ 0.18
SEC61A1P61619 HLA-A-209ENST00000638375 975 ntBASIC16.18■□□□□ 0.18
SEC61A1P61619 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61A1P61619 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61A1P61619 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.18■□□□□ 0.18
SEC61A1P61619 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61A1P61619 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SEC61A1P61619 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.18■□□□□ 0.18
SEC61A1P61619 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61A1P61619 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.18■□□□□ 0.18
SEC61A1P61619 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61A1P61619 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.18■□□□□ 0.18
SEC61A1P61619 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SEC61A1P61619 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.17■□□□□ 0.18
SEC61A1P61619 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.17■□□□□ 0.18
SEC61A1P61619 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.17■□□□□ 0.18
SEC61A1P61619 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SEC61A1P61619 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SEC61A1P61619 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 KRT8P8-201ENST00000434750 1448 ntBASIC16.17■□□□□ 0.18
SEC61A1P61619 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SEC61A1P61619 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SEC61A1P61619 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SEC61A1P61619 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SEC61A1P61619 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SEC61A1P61619 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 ABALON-201ENST00000629058 1903 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 TEX21P-204ENST00000641479 1693 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.16■□□□□ 0.18
SEC61A1P61619 AL390955.1-201ENST00000428694 934 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 AC004980.1-204ENST00000429707 299 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.16■□□□□ 0.18
SEC61A1P61619 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.16■□□□□ 0.18
SEC61A1P61619 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.16■□□□□ 0.18
SEC61A1P61619 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.16■□□□□ 0.18
SEC61A1P61619 AC133561.5-201ENST00000635547 218 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 AL031985.4-201ENST00000642138 673 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.16■□□□□ 0.18
SEC61A1P61619 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SEC61A1P61619 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 ZNF815P-204ENST00000434898 1737 ntBASIC16.16■□□□□ 0.18
SEC61A1P61619 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SEC61A1P61619 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
SEC61A1P61619 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61A1P61619 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms