Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 AC006116.8-202ENST00000587620 1550 ntBASIC16.85■□□□□ 0.29
CXCR4P61073 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CXCR4P61073 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CXCR4P61073 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CXCR4P61073 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCR4P61073 PP12613-201ENST00000424958 2230 ntBASIC16.85■□□□□ 0.29
CXCR4P61073 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCR4P61073 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CXCR4P61073 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.85■□□□□ 0.29
CXCR4P61073 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.84■□□□□ 0.29
CXCR4P61073 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.84■□□□□ 0.29
CXCR4P61073 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.84■□□□□ 0.29
CXCR4P61073 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.84■□□□□ 0.29
CXCR4P61073 AC083880.1-201ENST00000608266 535 ntBASIC16.84■□□□□ 0.29
CXCR4P61073 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.84■□□□□ 0.29
CXCR4P61073 AL357033.4-201ENST00000617703 1807 ntBASIC16.84■□□□□ 0.29
CXCR4P61073 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
CXCR4P61073 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CXCR4P61073 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CXCR4P61073 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CXCR4P61073 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CXCR4P61073 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.83■□□□□ 0.28
CXCR4P61073 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CXCR4P61073 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.83■□□□□ 0.28
CXCR4P61073 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.83■□□□□ 0.28
CXCR4P61073 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 AL160286.2-201ENST00000567150 934 ntBASIC16.83■□□□□ 0.28
CXCR4P61073 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.83■□□□□ 0.28
CXCR4P61073 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 AL023806.1-201ENST00000603994 1649 ntBASIC16.83■□□□□ 0.28
CXCR4P61073 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CXCR4P61073 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.83■□□□□ 0.28
CXCR4P61073 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CXCR4P61073 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CXCR4P61073 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CXCR4P61073 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms