Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PVRIG2P-201ENST00000435460 978 ntBASIC18.21■□□□□ 0.51
SRP54P61011 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
SRP54P61011 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.21■□□□□ 0.51
SRP54P61011 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.21■□□□□ 0.51
SRP54P61011 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.21■□□□□ 0.51
SRP54P61011 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.21■□□□□ 0.51
SRP54P61011 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.21■□□□□ 0.51
SRP54P61011 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.21■□□□□ 0.51
SRP54P61011 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
SRP54P61011 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.21■□□□□ 0.51
SRP54P61011 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.21■□□□□ 0.51
SRP54P61011 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.21■□□□□ 0.51
SRP54P61011 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRP54P61011 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.21■□□□□ 0.51
SRP54P61011 AC093525.10-201ENST00000625130 1569 ntBASIC18.21■□□□□ 0.51
SRP54P61011 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
SRP54P61011 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SRP54P61011 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.21■□□□□ 0.5
SRP54P61011 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
SRP54P61011 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 AC116562.4-201ENST00000641316 2276 ntBASIC18.2■□□□□ 0.5
SRP54P61011 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.2■□□□□ 0.5
SRP54P61011 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SRP54P61011 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.2■□□□□ 0.5
SRP54P61011 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SRP54P61011 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SRP54P61011 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 TSSC2-201ENST00000450217 709 ntBASIC18.2■□□□□ 0.5
SRP54P61011 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.2■□□□□ 0.5
SRP54P61011 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.2■□□□□ 0.5
SRP54P61011 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 NPAP1P7-201ENST00000613027 823 ntBASIC18.2■□□□□ 0.5
SRP54P61011 AC083906.6-201ENST00000641366 219 ntBASIC18.2■□□□□ 0.5
SRP54P61011 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.2■□□□□ 0.5
SRP54P61011 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.2■□□□□ 0.5
SRP54P61011 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SRP54P61011 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.2■□□□□ 0.5
SRP54P61011 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRP54P61011 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
SRP54P61011 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 AC016734.2-201ENST00000624325 1377 ntBASIC18.19■□□□□ 0.5
SRP54P61011 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SRP54P61011 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.19■□□□□ 0.5
SRP54P61011 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 KRT8P26-201ENST00000534154 1276 ntBASIC18.19■□□□□ 0.5
SRP54P61011 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.19■□□□□ 0.5
SRP54P61011 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.19■□□□□ 0.5
SRP54P61011 AC009065.1-201ENST00000564055 1225 ntBASIC18.19■□□□□ 0.5
SRP54P61011 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.19■□□□□ 0.5
SRP54P61011 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 AC092119.3-201ENST00000612618 583 ntBASIC18.19■□□□□ 0.5
SRP54P61011 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRP54P61011 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.19■□□□□ 0.5
SRP54P61011 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.19■□□□□ 0.5
SRP54P61011 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRP54P61011 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.19■□□□□ 0.5
SRP54P61011 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRP54P61011 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
SRP54P61011 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 LETM1P2-201ENST00000597330 2178 ntBASIC18.18■□□□□ 0.5
SRP54P61011 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SRP54P61011 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 KRT8P50-201ENST00000562022 1438 ntBASIC18.18■□□□□ 0.5
SRP54P61011 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms