Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN8P56748 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
CLDN8P56748 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN8P56748 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN8P56748 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN8P56748 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN8P56748 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN8P56748 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN8P56748 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN8P56748 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN8P56748 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN8P56748 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN8P56748 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN8P56748 GMCL1P1-201ENST00000463439 1581 ntBASIC17.58■□□□□ 0.41
CLDN8P56748 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CLDN8P56748 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN8P56748 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN8P56748 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN8P56748 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN8P56748 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN8P56748 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.58■□□□□ 0.4
CLDN8P56748 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN8P56748 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CLDN8P56748 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN8P56748 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 FLJ13224-201ENST00000313737 1514 ntBASIC17.57■□□□□ 0.4
CLDN8P56748 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN8P56748 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 RPS2P55-201ENST00000397318 883 ntBASIC17.57■□□□□ 0.4
CLDN8P56748 AC107956.1-201ENST00000494359 873 ntBASIC17.57■□□□□ 0.4
CLDN8P56748 MIR3180-5-201ENST00000583743 153 ntBASIC17.57■□□□□ 0.4
CLDN8P56748 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN8P56748 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN8P56748 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDN8P56748 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN8P56748 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CLDN8P56748 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 ABHD17AP1-201ENST00000358206 933 ntBASIC17.56■□□□□ 0.4
CLDN8P56748 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 AC142381.4-202ENST00000563973 229 ntBASIC17.56■□□□□ 0.4
CLDN8P56748 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN8P56748 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 AP001412.1-201ENST00000608405 714 ntBASIC17.56■□□□□ 0.4
CLDN8P56748 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN8P56748 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN8P56748 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN8P56748 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms