Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH11P55287 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH11P55287 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH11P55287 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH11P55287 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.96■□□□□ 0.31
CDH11P55287 AC133561.5-201ENST00000635547 218 ntBASIC16.96■□□□□ 0.31
CDH11P55287 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH11P55287 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH11P55287 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH11P55287 AC067852.2-201ENST00000590513 2313 ntBASIC16.96■□□□□ 0.3
CDH11P55287 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH11P55287 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.96■□□□□ 0.3
CDH11P55287 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH11P55287 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH11P55287 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH11P55287 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH11P55287 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH11P55287 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH11P55287 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDH11P55287 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH11P55287 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH11P55287 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH11P55287 TSPY23P-201ENST00000440136 739 ntBASIC16.95■□□□□ 0.3
CDH11P55287 KSR1P1-201ENST00000446298 240 ntBASIC16.95■□□□□ 0.3
CDH11P55287 NUDT16P1-203ENST00000513809 620 ntBASIC16.95■□□□□ 0.3
CDH11P55287 CR392000.1-201ENST00000624770 1228 ntBASIC16.95■□□□□ 0.3
CDH11P55287 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH11P55287 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 FZD10-202ENST00000539839 3282 ntBASIC16.95■□□□□ 0.3
CDH11P55287 KRT16P1-201ENST00000399124 1418 ntBASIC16.95■□□□□ 0.3
CDH11P55287 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH11P55287 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH11P55287 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDH11P55287 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH11P55287 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH11P55287 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH11P55287 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH11P55287 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH11P55287 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH11P55287 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
CDH11P55287 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH11P55287 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH11P55287 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
CDH11P55287 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH11P55287 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDH11P55287 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH11P55287 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
CDH11P55287 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH11P55287 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH11P55287 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH11P55287 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH11P55287 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH11P55287 AL160286.2-201ENST00000567150 934 ntBASIC16.93■□□□□ 0.3
CDH11P55287 C1QL1P1-201ENST00000568105 661 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms