Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH6P55285 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 INGX-201ENST00000359239 846 ntBASIC19.23■□□□□ 0.67
CDH6P55285 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH6P55285 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 EGLN1P1-201ENST00000531623 762 ntBASIC19.23■□□□□ 0.67
CDH6P55285 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CDH6P55285 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.23■□□□□ 0.67
CDH6P55285 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH6P55285 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH6P55285 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH6P55285 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH6P55285 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDH6P55285 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDH6P55285 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH6P55285 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH6P55285 NAPSB-206ENST00000562112 1266 ntBASIC19.22■□□□□ 0.67
CDH6P55285 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 AC010947.1-201ENST00000623454 693 ntBASIC19.22■□□□□ 0.67
CDH6P55285 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH6P55285 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH6P55285 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 AC090340.1-201ENST00000620778 4980 ntBASIC19.22■□□□□ 0.67
CDH6P55285 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH6P55285 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH6P55285 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 AC099343.3-201ENST00000605834 2503 ntBASIC19.21■□□□□ 0.67
CDH6P55285 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 AL162741.1-201ENST00000565563 1558 ntBASIC19.21■□□□□ 0.67
CDH6P55285 WWOX-216ENST00000569818 525 ntBASIC19.21■□□□□ 0.67
CDH6P55285 AC010653.2-201ENST00000623505 997 ntBASIC19.21■□□□□ 0.67
CDH6P55285 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CDH6P55285 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH6P55285 ABALON-201ENST00000629058 1903 ntBASIC19.21■□□□□ 0.67
CDH6P55285 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH6P55285 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDH6P55285 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.21■□□□□ 0.66
CDH6P55285 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
CDH6P55285 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH6P55285 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH6P55285 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDH6P55285 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH6P55285 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDH6P55285 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH6P55285 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 KRT18P23-201ENST00000435622 1283 ntBASIC19.2■□□□□ 0.66
CDH6P55285 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.2■□□□□ 0.66
CDH6P55285 AC128688.1-201ENST00000487626 519 ntBASIC19.2■□□□□ 0.66
CDH6P55285 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms