Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 FAM207BP-201ENST00000447172 505 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGA2P52926 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
HMGA2P52926 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGA2P52926 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HMGA2P52926 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HMGA2P52926 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 AC139713.2-201ENST00000641328 2723 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMGA2P52926 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 AL023284.2-201ENST00000405850 579 ntBASIC16.88■□□□□ 0.29
HMGA2P52926 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGA2P52926 AL353807.1-201ENST00000427475 662 ntBASIC16.88■□□□□ 0.29
HMGA2P52926 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.88■□□□□ 0.29
HMGA2P52926 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
HMGA2P52926 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGA2P52926 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGA2P52926 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGA2P52926 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGA2P52926 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 AC011506.1-201ENST00000474329 610 ntBASIC16.87■□□□□ 0.29
HMGA2P52926 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
HMGA2P52926 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGA2P52926 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.87■□□□□ 0.29
HMGA2P52926 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGA2P52926 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGA2P52926 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.87■□□□□ 0.29
HMGA2P52926 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMGA2P52926 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGA2P52926 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGA2P52926 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGA2P52926 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGA2P52926 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 RNA5SP413-201ENST00000516373 109 ntBASIC16.86■□□□□ 0.29
HMGA2P52926 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.86■□□□□ 0.29
HMGA2P52926 AP000692.2-201ENST00000608391 879 ntBASIC16.86■□□□□ 0.29
HMGA2P52926 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HMGA2P52926 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGA2P52926 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGA2P52926 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGA2P52926 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGA2P52926 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGA2P52926 KRT18P55-202ENST00000578578 1546 ntBASIC16.86■□□□□ 0.29
HMGA2P52926 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms