Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.64■□□□□ 0.73
BRCC3P46736 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCC3P46736 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
BRCC3P46736 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
BRCC3P46736 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCC3P46736 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BRCC3P46736 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.63■□□□□ 0.73
BRCC3P46736 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.63■□□□□ 0.73
BRCC3P46736 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCC3P46736 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCC3P46736 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BRCC3P46736 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
BRCC3P46736 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
BRCC3P46736 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 MYLKP1-201ENST00000509077 1580 ntBASIC19.62■□□□□ 0.73
BRCC3P46736 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCC3P46736 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 MIR149-201ENST00000384879 89 ntBASIC19.62■□□□□ 0.73
BRCC3P46736 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCC3P46736 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.62■□□□□ 0.73
BRCC3P46736 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCC3P46736 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.62■□□□□ 0.73
BRCC3P46736 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BRCC3P46736 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.62■□□□□ 0.73
BRCC3P46736 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.62■□□□□ 0.73
BRCC3P46736 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.62■□□□□ 0.73
BRCC3P46736 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.62■□□□□ 0.73
BRCC3P46736 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.62■□□□□ 0.73
BRCC3P46736 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
BRCC3P46736 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BRCC3P46736 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BRCC3P46736 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRCC3P46736 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
BRCC3P46736 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.61■□□□□ 0.73
BRCC3P46736 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRCC3P46736 AC009102.3-201ENST00000623118 1491 ntBASIC19.61■□□□□ 0.73
BRCC3P46736 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 AL353692.3-201ENST00000407031 1396 ntBASIC19.61■□□□□ 0.73
BRCC3P46736 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCC3P46736 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.61■□□□□ 0.73
BRCC3P46736 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.61■□□□□ 0.73
BRCC3P46736 AC090616.6-201ENST00000582640 721 ntBASIC19.61■□□□□ 0.73
BRCC3P46736 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.61■□□□□ 0.73
BRCC3P46736 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BRCC3P46736 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCC3P46736 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRCC3P46736 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.61■□□□□ 0.73
BRCC3P46736 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRCC3P46736 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRCC3P46736 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms