Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPHP41219 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPHP41219 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 AP000523.1-201ENST00000398242 1049 ntBASIC20.87■□□□□ 0.93
PRPHP41219 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 AC009065.1-201ENST00000564055 1225 ntBASIC20.87■□□□□ 0.93
PRPHP41219 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPHP41219 AC141257.4-201ENST00000634557 245 ntBASIC20.87■□□□□ 0.93
PRPHP41219 AC136944.6-201ENST00000634818 245 ntBASIC20.87■□□□□ 0.93
PRPHP41219 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRPHP41219 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPHP41219 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPHP41219 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPHP41219 AC009102.3-201ENST00000623118 1491 ntBASIC20.87■□□□□ 0.93
PRPHP41219 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPHP41219 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRPHP41219 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRPHP41219 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPHP41219 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPHP41219 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPHP41219 NEFHP1-201ENST00000412845 2629 ntBASIC20.86■□□□□ 0.93
PRPHP41219 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRPHP41219 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.86■□□□□ 0.93
PRPHP41219 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPHP41219 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 SDHAP2-201ENST00000455183 2001 ntBASIC20.86■□□□□ 0.93
PRPHP41219 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPHP41219 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRPHP41219 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPHP41219 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPHP41219 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRPHP41219 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PRPHP41219 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.85■□□□□ 0.93
PRPHP41219 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.85■□□□□ 0.93
PRPHP41219 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 AC010240.3-201ENST00000607688 395 ntBASIC20.85■□□□□ 0.93
PRPHP41219 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PRPHP41219 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPHP41219 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
PRPHP41219 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPHP41219 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPHP41219 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PRPHP41219 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPHP41219 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPHP41219 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPHP41219 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRPHP41219 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPHP41219 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms