Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC3P40938 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC3P40938 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.91■□□□□ 0.3
RFC3P40938 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC3P40938 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.9■□□□□ 0.3
RFC3P40938 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.9■□□□□ 0.3
RFC3P40938 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 AC092119.3-201ENST00000612618 583 ntBASIC16.9■□□□□ 0.3
RFC3P40938 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 AL391807.1-203ENST00000604392 2365 ntBASIC16.9■□□□□ 0.3
RFC3P40938 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RFC3P40938 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC3P40938 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFC3P40938 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC3P40938 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFC3P40938 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFC3P40938 AC005332.7-201ENST00000614046 2005 ntBASIC16.89■□□□□ 0.29
RFC3P40938 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.89■□□□□ 0.29
RFC3P40938 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFC3P40938 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.89■□□□□ 0.29
RFC3P40938 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
RFC3P40938 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.89■□□□□ 0.29
RFC3P40938 AC068587.9-201ENST00000641814 219 ntBASIC16.89■□□□□ 0.29
RFC3P40938 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFC3P40938 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC3P40938 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFC3P40938 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC3P40938 AC034236.2-201ENST00000606662 1610 ntBASIC16.88■□□□□ 0.29
RFC3P40938 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC3P40938 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC3P40938 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 KRT18P48-201ENST00000434763 852 ntBASIC16.88■□□□□ 0.29
RFC3P40938 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC3P40938 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.88■□□□□ 0.29
RFC3P40938 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC3P40938 AC104390.1-201ENST00000555663 520 ntBASIC16.88■□□□□ 0.29
RFC3P40938 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.88■□□□□ 0.29
RFC3P40938 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC3P40938 AC011498.5-201ENST00000592027 486 ntBASIC16.88■□□□□ 0.29
RFC3P40938 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC3P40938 AC012313.10-201ENST00000623509 926 ntBASIC16.88■□□□□ 0.29
RFC3P40938 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
RFC3P40938 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms