Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.76■□□□□ 0.27
GDF1P27539 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GDF1P27539 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GDF1P27539 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GDF1P27539 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GDF1P27539 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
GDF1P27539 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.75■□□□□ 0.27
GDF1P27539 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
GDF1P27539 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GDF1P27539 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.75■□□□□ 0.27
GDF1P27539 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 AC069148.1-201ENST00000608741 768 ntBASIC16.75■□□□□ 0.27
GDF1P27539 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
GDF1P27539 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDF1P27539 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.74■□□□□ 0.27
GDF1P27539 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
GDF1P27539 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.74■□□□□ 0.27
GDF1P27539 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.74■□□□□ 0.27
GDF1P27539 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GDF1P27539 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
GDF1P27539 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
GDF1P27539 HLA-F-220ENST00000434407 884 ntBASIC16.74■□□□□ 0.27
GDF1P27539 PVRIG2P-201ENST00000435460 978 ntBASIC16.74■□□□□ 0.27
GDF1P27539 KRT18P41-201ENST00000518924 1277 ntBASIC16.74■□□□□ 0.27
GDF1P27539 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GDF1P27539 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.74■□□□□ 0.27
GDF1P27539 RNF165-205ENST00000588679 2904 ntBASIC16.74■□□□□ 0.27
GDF1P27539 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.74■□□□□ 0.27
GDF1P27539 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDF1P27539 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GDF1P27539 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GDF1P27539 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GDF1P27539 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.73■□□□□ 0.27
GDF1P27539 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.73■□□□□ 0.27
GDF1P27539 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.73■□□□□ 0.27
GDF1P27539 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.73■□□□□ 0.27
GDF1P27539 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms