Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 PCDHB18P-201ENST00000524813 2368 ntBASIC16.08■□□□□ 0.16
ACKR3P25106 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.08■□□□□ 0.16
ACKR3P25106 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 GPAT2P1-201ENST00000444924 1672 ntBASIC16.08■□□□□ 0.16
ACKR3P25106 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.08■□□□□ 0.16
ACKR3P25106 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 AP000997.3-201ENST00000623333 2250 ntBASIC16.07■□□□□ 0.16
ACKR3P25106 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.07■□□□□ 0.16
ACKR3P25106 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 AL023284.2-201ENST00000405850 579 ntBASIC16.07■□□□□ 0.16
ACKR3P25106 CRYGFP-201ENST00000418459 633 ntBASIC16.07■□□□□ 0.16
ACKR3P25106 TSPY7P-201ENST00000431358 1114 ntBASIC16.07■□□□□ 0.16
ACKR3P25106 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.07■□□□□ 0.16
ACKR3P25106 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.07■□□□□ 0.16
ACKR3P25106 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.07■□□□□ 0.16
ACKR3P25106 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ACKR3P25106 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
ACKR3P25106 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.07■□□□□ 0.16
ACKR3P25106 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACKR3P25106 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.07■□□□□ 0.16
ACKR3P25106 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ACKR3P25106 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.06■□□□□ 0.16
ACKR3P25106 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 AC112777.1-201ENST00000540175 1423 ntBASIC16.06■□□□□ 0.16
ACKR3P25106 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.06■□□□□ 0.16
ACKR3P25106 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.06■□□□□ 0.16
ACKR3P25106 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.06■□□□□ 0.16
ACKR3P25106 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ACKR3P25106 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 AL133373.2-201ENST00000623187 2828 ntBASIC16.06■□□□□ 0.16
ACKR3P25106 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.06■□□□□ 0.16
ACKR3P25106 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ACKR3P25106 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACKR3P25106 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ACKR3P25106 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.05■□□□□ 0.16
ACKR3P25106 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
ACKR3P25106 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.05■□□□□ 0.16
ACKR3P25106 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ACKR3P25106 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.05■□□□□ 0.16
ACKR3P25106 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.05■□□□□ 0.16
ACKR3P25106 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.05■□□□□ 0.16
ACKR3P25106 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ACKR3P25106 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms