Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MMP11P24347 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.55■□□□□ 0.4
MMP11P24347 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.55■□□□□ 0.4
MMP11P24347 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.55■□□□□ 0.4
MMP11P24347 VENTXP5-201ENST00000523979 775 ntBASIC17.55■□□□□ 0.4
MMP11P24347 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MMP11P24347 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.55■□□□□ 0.4
MMP11P24347 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.55■□□□□ 0.4
MMP11P24347 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
MMP11P24347 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 Z98044.1-201ENST00000632503 1764 ntBASIC17.55■□□□□ 0.4
MMP11P24347 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.55■□□□□ 0.4
MMP11P24347 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.55■□□□□ 0.4
MMP11P24347 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
MMP11P24347 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.54■□□□□ 0.4
MMP11P24347 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MMP11P24347 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.54■□□□□ 0.4
MMP11P24347 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 RASA4DP-201ENST00000460726 1199 ntBASIC17.54■□□□□ 0.4
MMP11P24347 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.54■□□□□ 0.4
MMP11P24347 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.54■□□□□ 0.4
MMP11P24347 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 AC024243.1-201ENST00000609234 778 ntBASIC17.54■□□□□ 0.4
MMP11P24347 AC083849.1-201ENST00000615227 514 ntBASIC17.54■□□□□ 0.4
MMP11P24347 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.54■□□□□ 0.4
MMP11P24347 AC116407.4-201ENST00000623319 1061 ntBASIC17.54■□□□□ 0.4
MMP11P24347 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 AL109659.2-201ENST00000606809 1674 ntBASIC17.54■□□□□ 0.4
MMP11P24347 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MMP11P24347 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP11P24347 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MMP11P24347 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 AL512353.2-201ENST00000448759 1962 ntBASIC17.53■□□□□ 0.4
MMP11P24347 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.53■□□□□ 0.4
MMP11P24347 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.53■□□□□ 0.4
MMP11P24347 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP11P24347 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MMP11P24347 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms