Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3BP20337 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3BP20337 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3BP20337 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3BP20337 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3BP20337 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3BP20337 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3BP20337 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB3BP20337 AL357033.4-201ENST00000617703 1807 ntBASIC16.21■□□□□ 0.19
RAB3BP20337 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3BP20337 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB3BP20337 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB3BP20337 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3BP20337 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3BP20337 AC092368.3-202ENST00000574180 1591 ntBASIC16.21■□□□□ 0.18
RAB3BP20337 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
RAB3BP20337 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.18
RAB3BP20337 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3BP20337 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB3BP20337 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.21■□□□□ 0.18
RAB3BP20337 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB3BP20337 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB3BP20337 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 AC120498.8-201ENST00000614275 531 ntBASIC16.2■□□□□ 0.18
RAB3BP20337 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.2■□□□□ 0.18
RAB3BP20337 HLA-A-209ENST00000638375 975 ntBASIC16.2■□□□□ 0.18
RAB3BP20337 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB3BP20337 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB3BP20337 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB3BP20337 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3BP20337 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB3BP20337 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.19■□□□□ 0.18
RAB3BP20337 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB3BP20337 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAB3BP20337 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB3BP20337 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB3BP20337 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAB3BP20337 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 AC011270.2-201ENST00000624293 2550 ntBASIC16.19■□□□□ 0.18
RAB3BP20337 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3BP20337 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3BP20337 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB3BP20337 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3BP20337 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3BP20337 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3BP20337 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3BP20337 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3BP20337 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3BP20337 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3BP20337 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3BP20337 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3BP20337 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3BP20337 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3BP20337 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms