Protein–RNA interactions for Protein: P05106

ITGB3, Integrin beta-3, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3P05106 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.83■□□□□ 0.77
ITGB3P05106 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGB3P05106 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.82■□□□□ 0.76
ITGB3P05106 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ITGB3P05106 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ITGB3P05106 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 AC009102.3-201ENST00000623118 1491 ntBASIC19.82■□□□□ 0.76
ITGB3P05106 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ITGB3P05106 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
ITGB3P05106 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGB3P05106 HLA-F-220ENST00000434407 884 ntBASIC19.82■□□□□ 0.76
ITGB3P05106 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGB3P05106 FAM86EP-206ENST00000510506 987 ntBASIC19.82■□□□□ 0.76
ITGB3P05106 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGB3P05106 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.82■□□□□ 0.76
ITGB3P05106 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGB3P05106 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ITGB3P05106 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB3P05106 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
ITGB3P05106 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB3P05106 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
ITGB3P05106 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ITGB3P05106 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.81■□□□□ 0.76
ITGB3P05106 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.81■□□□□ 0.76
ITGB3P05106 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB3P05106 AL358472.4-201ENST00000633140 710 ntBASIC19.81■□□□□ 0.76
ITGB3P05106 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ITGB3P05106 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB3P05106 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB3P05106 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGB3P05106 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ITGB3P05106 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 AC005332.1-201ENST00000577698 1310 ntBASIC19.8■□□□□ 0.76
ITGB3P05106 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 SDHAP2-201ENST00000455183 2001 ntBASIC19.8■□□□□ 0.76
ITGB3P05106 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.8■□□□□ 0.76
ITGB3P05106 WIZP1-201ENST00000531444 2299 ntBASIC19.8■□□□□ 0.76
ITGB3P05106 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB3P05106 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB3P05106 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ITGB3P05106 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB3P05106 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB3P05106 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ITGB3P05106 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ITGB3P05106 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB3P05106 AL136038.3-201ENST00000561909 1096 ntBASIC19.79■□□□□ 0.76
ITGB3P05106 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ITGB3P05106 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ITGB3P05106 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB3P05106 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGB3P05106 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGB3P05106 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGB3P05106 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.78■□□□□ 0.76
ITGB3P05106 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGB3P05106 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms