Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04436 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04436 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04436 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04436 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P04436 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.89■□□□□ 0.29
P04436 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
P04436 HTR7P1-202ENST00000624664 4411 ntBASIC16.88■□□□□ 0.29
P04436 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 AC112777.1-201ENST00000540175 1423 ntBASIC16.88■□□□□ 0.29
P04436 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.88■□□□□ 0.29
P04436 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
P04436 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P04436 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.88■□□□□ 0.29
P04436 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.88■□□□□ 0.29
P04436 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.88■□□□□ 0.29
P04436 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.88■□□□□ 0.29
P04436 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P04436 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.88■□□□□ 0.29
P04436 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
P04436 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.88■□□□□ 0.29
P04436 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.88■□□□□ 0.29
P04436 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.88■□□□□ 0.29
P04436 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
P04436 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04436 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.87■□□□□ 0.29
P04436 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
P04436 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.87■□□□□ 0.29
P04436 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
P04436 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
P04436 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 SPDYE13P-201ENST00000445314 798 ntBASIC16.87■□□□□ 0.29
P04436 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.87■□□□□ 0.29
P04436 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.87■□□□□ 0.29
P04436 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
P04436 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.87■□□□□ 0.29
P04436 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.87■□□□□ 0.29
P04436 AC069148.1-201ENST00000608741 768 ntBASIC16.87■□□□□ 0.29
P04436 AC093458.2-201ENST00000623150 629 ntBASIC16.87■□□□□ 0.29
P04436 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
P04436 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
P04436 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04436 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
P04436 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 AL163051.1-201ENST00000569214 1512 ntBASIC16.86■□□□□ 0.29
P04436 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
P04436 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.86■□□□□ 0.29
P04436 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.86■□□□□ 0.29
P04436 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.86■□□□□ 0.29
P04436 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.86■□□□□ 0.29
P04436 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.86■□□□□ 0.29
P04436 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04436 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms