Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD74P04233 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD74P04233 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.55■□□□□ 0.08
CD74P04233 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.54■□□□□ 0.08
CD74P04233 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CD74P04233 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.54■□□□□ 0.08
CD74P04233 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.54■□□□□ 0.08
CD74P04233 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.54■□□□□ 0.08
CD74P04233 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.54■□□□□ 0.08
CD74P04233 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD74P04233 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD74P04233 AL139384.1-201ENST00000612143 3047 ntBASIC15.54■□□□□ 0.08
CD74P04233 BCL2-203ENST00000589955 5011 ntBASIC15.54■□□□□ 0.08
CD74P04233 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
CD74P04233 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CD74P04233 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.53■□□□□ 0.08
CD74P04233 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.53■□□□□ 0.08
CD74P04233 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 KRT8P11-201ENST00000409686 1436 ntBASIC15.53■□□□□ 0.08
CD74P04233 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CD74P04233 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 MIPEPP3-201ENST00000412105 444 ntBASIC15.53■□□□□ 0.08
CD74P04233 AC004911.1-201ENST00000416316 871 ntBASIC15.53■□□□□ 0.08
CD74P04233 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.53■□□□□ 0.08
CD74P04233 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.53■□□□□ 0.08
CD74P04233 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.53■□□□□ 0.08
CD74P04233 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.53■□□□□ 0.08
CD74P04233 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CD74P04233 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.53■□□□□ 0.08
CD74P04233 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.53■□□□□ 0.08
CD74P04233 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CD74P04233 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.53■□□□□ 0.08
CD74P04233 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.53■□□□□ 0.08
CD74P04233 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD74P04233 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CD74P04233 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CD74P04233 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
CD74P04233 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD74P04233 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.52■□□□□ 0.08
CD74P04233 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.52■□□□□ 0.08
CD74P04233 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.52■□□□□ 0.08
CD74P04233 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.52■□□□□ 0.08
CD74P04233 Z85996.1-201ENST00000494644 937 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms