Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
KRT6AP02538 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6AP02538 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.93■□□□□ 0.46
KRT6AP02538 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6AP02538 AL023284.2-201ENST00000405850 579 ntBASIC17.93■□□□□ 0.46
KRT6AP02538 AL355355.2-201ENST00000442321 338 ntBASIC17.93■□□□□ 0.46
KRT6AP02538 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT6AP02538 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT6AP02538 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
KRT6AP02538 AC113410.3-201ENST00000623366 203 ntBASIC17.93■□□□□ 0.46
KRT6AP02538 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
KRT6AP02538 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT6AP02538 MIR564-202ENST00000385049 94 ntBASIC17.92■□□□□ 0.46
KRT6AP02538 AP000593.1-201ENST00000393668 712 ntBASIC17.92■□□□□ 0.46
KRT6AP02538 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6AP02538 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6AP02538 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6AP02538 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 NOC2LP1-202ENST00000452600 2235 ntBASIC17.92■□□□□ 0.46
KRT6AP02538 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT6AP02538 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6AP02538 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT6AP02538 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT6AP02538 REXO1L10P-201ENST00000615707 1290 ntBASIC17.91■□□□□ 0.46
KRT6AP02538 REXO1L12P-201ENST00000622156 912 ntBASIC17.91■□□□□ 0.46
KRT6AP02538 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
KRT6AP02538 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KRT6AP02538 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6AP02538 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6AP02538 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT6AP02538 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT6AP02538 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms