Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 AP006587.1-201ENST00000534129 1502 ntBASIC16.5■□□□□ 0.23
CDRT1O95170 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 AC006970.2-201ENST00000450065 779 ntBASIC16.5■□□□□ 0.23
CDRT1O95170 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 AC092118.2-201ENST00000613495 667 ntBASIC16.5■□□□□ 0.23
CDRT1O95170 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.5■□□□□ 0.23
CDRT1O95170 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDRT1O95170 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
CDRT1O95170 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.49■□□□□ 0.23
CDRT1O95170 REXO1L9P-201ENST00000604264 2108 ntBASIC16.49■□□□□ 0.23
CDRT1O95170 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.49■□□□□ 0.23
CDRT1O95170 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDRT1O95170 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 YBX1P10-201ENST00000444752 975 ntBASIC16.49■□□□□ 0.23
CDRT1O95170 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.49■□□□□ 0.23
CDRT1O95170 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.49■□□□□ 0.23
CDRT1O95170 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.49■□□□□ 0.23
CDRT1O95170 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDRT1O95170 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.48■□□□□ 0.23
CDRT1O95170 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 AC092368.3-202ENST00000574180 1591 ntBASIC16.48■□□□□ 0.23
CDRT1O95170 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.48■□□□□ 0.23
CDRT1O95170 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.48■□□□□ 0.23
CDRT1O95170 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDRT1O95170 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.48■□□□□ 0.23
CDRT1O95170 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.48■□□□□ 0.23
CDRT1O95170 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CDRT1O95170 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDRT1O95170 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms