Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ALX3O95076 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
ALX3O95076 AC103702.1-201ENST00000548801 2630 ntBASIC16.36■□□□□ 0.21
ALX3O95076 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ALX3O95076 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.36■□□□□ 0.21
ALX3O95076 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ALX3O95076 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.36■□□□□ 0.21
ALX3O95076 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
ALX3O95076 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ALX3O95076 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ALX3O95076 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ALX3O95076 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ALX3O95076 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.35■□□□□ 0.21
ALX3O95076 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.35■□□□□ 0.21
ALX3O95076 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.35■□□□□ 0.21
ALX3O95076 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 AC126763.1-201ENST00000552015 2118 ntBASIC16.35■□□□□ 0.21
ALX3O95076 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.35■□□□□ 0.21
ALX3O95076 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ALX3O95076 AC073592.3-201ENST00000625118 1834 ntBASIC16.35■□□□□ 0.21
ALX3O95076 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALX3O95076 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.35■□□□□ 0.21
ALX3O95076 AC008764.6-201ENST00000595909 2069 ntBASIC16.34■□□□□ 0.21
ALX3O95076 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ALX3O95076 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.34■□□□□ 0.21
ALX3O95076 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ALX3O95076 AD000864.1-201ENST00000624076 2295 ntBASIC16.34■□□□□ 0.21
ALX3O95076 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.34■□□□□ 0.21
ALX3O95076 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 AC135776.1-201ENST00000319817 2481 ntBASIC16.34■□□□□ 0.21
ALX3O95076 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 KRT18P29-201ENST00000397031 1267 ntBASIC16.34■□□□□ 0.21
ALX3O95076 TSPY23P-201ENST00000440136 739 ntBASIC16.34■□□□□ 0.21
ALX3O95076 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.34■□□□□ 0.21
ALX3O95076 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.34■□□□□ 0.21
ALX3O95076 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ALX3O95076 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALX3O95076 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.34■□□□□ 0.21
ALX3O95076 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALX3O95076 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALX3O95076 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.33■□□□□ 0.21
ALX3O95076 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ALX3O95076 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
ALX3O95076 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALX3O95076 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALX3O95076 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ALX3O95076 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ALX3O95076 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms