Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 AC073648.6-201ENST00000641589 218 ntBASIC16.41■□□□□ 0.22
ZNF254O75437 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF254O75437 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF254O75437 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF254O75437 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 AC008764.6-201ENST00000595909 2069 ntBASIC16.41■□□□□ 0.22
ZNF254O75437 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF254O75437 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF254O75437 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 AC006058.3-201ENST00000606217 1069 ntBASIC16.4■□□□□ 0.22
ZNF254O75437 AC011298.2-201ENST00000617989 482 ntBASIC16.4■□□□□ 0.22
ZNF254O75437 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF254O75437 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 AL499627.1-201ENST00000569373 2188 ntBASIC16.4■□□□□ 0.22
ZNF254O75437 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF254O75437 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF254O75437 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF254O75437 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF254O75437 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 AC067852.2-201ENST00000590513 2313 ntBASIC16.39■□□□□ 0.21
ZNF254O75437 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ZNF254O75437 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF254O75437 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF254O75437 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF254O75437 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF254O75437 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF254O75437 AC073195.1-201ENST00000607241 877 ntBASIC16.39■□□□□ 0.21
ZNF254O75437 AC130371.2-201ENST00000619443 611 ntBASIC16.39■□□□□ 0.21
ZNF254O75437 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.39■□□□□ 0.21
ZNF254O75437 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF254O75437 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF254O75437 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF254O75437 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF254O75437 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF254O75437 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF254O75437 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF254O75437 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF254O75437 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF254O75437 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF254O75437 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF254O75437 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF254O75437 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF254O75437 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF254O75437 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms