Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.56■■□□□ 1.04
CTNND1O60716 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.56■■□□□ 1.04
CTNND1O60716 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.56■■□□□ 1.04
CTNND1O60716 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTNND1O60716 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.55■■□□□ 1.04
CTNND1O60716 HLA-A-201ENST00000376802 1334 ntBASIC21.55■■□□□ 1.04
CTNND1O60716 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.55■■□□□ 1.04
CTNND1O60716 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.55■■□□□ 1.04
CTNND1O60716 AF238378.1-201ENST00000526806 358 ntBASIC21.55■■□□□ 1.04
CTNND1O60716 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.55■■□□□ 1.04
CTNND1O60716 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.55■■□□□ 1.04
CTNND1O60716 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTNND1O60716 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CTNND1O60716 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CTNND1O60716 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.54■■□□□ 1.04
CTNND1O60716 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.54■■□□□ 1.04
CTNND1O60716 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.54■■□□□ 1.04
CTNND1O60716 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.54■■□□□ 1.04
CTNND1O60716 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 AC079776.4-201ENST00000511039 504 ntBASIC21.54■■□□□ 1.04
CTNND1O60716 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.54■■□□□ 1.04
CTNND1O60716 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.54■■□□□ 1.04
CTNND1O60716 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.54■■□□□ 1.04
CTNND1O60716 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.54■■□□□ 1.04
CTNND1O60716 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.54■■□□□ 1.04
CTNND1O60716 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.54■■□□□ 1.04
CTNND1O60716 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTNND1O60716 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.54■■□□□ 1.04
CTNND1O60716 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CTNND1O60716 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CTNND1O60716 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.53■■□□□ 1.04
CTNND1O60716 AC113404.2-201ENST00000507884 177 ntBASIC21.53■■□□□ 1.04
CTNND1O60716 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.53■■□□□ 1.04
CTNND1O60716 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.53■■□□□ 1.04
CTNND1O60716 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTNND1O60716 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTNND1O60716 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.53■■□□□ 1.04
CTNND1O60716 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.53■■□□□ 1.04
CTNND1O60716 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTNND1O60716 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.53■■□□□ 1.04
CTNND1O60716 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.53■■□□□ 1.04
CTNND1O60716 AC093484.2-201ENST00000580996 2166 ntBASIC21.53■■□□□ 1.04
CTNND1O60716 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CTNND1O60716 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CTNND1O60716 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms