Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL121956.5-201ENST00000625261 221 ntBASIC18.73■□□□□ 0.59
KDELR3O43731 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
KDELR3O43731 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KDELR3O43731 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KDELR3O43731 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDELR3O43731 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KDELR3O43731 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KDELR3O43731 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KDELR3O43731 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 SPDYE13P-201ENST00000445314 798 ntBASIC18.72■□□□□ 0.59
KDELR3O43731 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.72■□□□□ 0.59
KDELR3O43731 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.72■□□□□ 0.59
KDELR3O43731 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.72■□□□□ 0.59
KDELR3O43731 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.72■□□□□ 0.59
KDELR3O43731 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.72■□□□□ 0.59
KDELR3O43731 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KDELR3O43731 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.72■□□□□ 0.59
KDELR3O43731 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KDELR3O43731 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KDELR3O43731 AC099343.3-201ENST00000605834 2503 ntBASIC18.71■□□□□ 0.59
KDELR3O43731 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KDELR3O43731 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
KDELR3O43731 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.71■□□□□ 0.59
KDELR3O43731 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.71■□□□□ 0.59
KDELR3O43731 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.71■□□□□ 0.59
KDELR3O43731 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.71■□□□□ 0.59
KDELR3O43731 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.71■□□□□ 0.59
KDELR3O43731 FAM86EP-206ENST00000510506 987 ntBASIC18.71■□□□□ 0.59
KDELR3O43731 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.71■□□□□ 0.59
KDELR3O43731 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.71■□□□□ 0.59
KDELR3O43731 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.71■□□□□ 0.59
KDELR3O43731 AL136038.3-201ENST00000561909 1096 ntBASIC18.71■□□□□ 0.59
KDELR3O43731 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KDELR3O43731 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KDELR3O43731 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.7■□□□□ 0.58
KDELR3O43731 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 MIR662-201ENST00000384847 95 ntBASIC18.7■□□□□ 0.58
KDELR3O43731 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 VENTXP5-201ENST00000523979 775 ntBASIC18.7■□□□□ 0.58
KDELR3O43731 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.7■□□□□ 0.58
KDELR3O43731 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.7■□□□□ 0.58
KDELR3O43731 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.7■□□□□ 0.58
KDELR3O43731 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KDELR3O43731 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
KDELR3O43731 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KDELR3O43731 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDELR3O43731 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
KDELR3O43731 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.69■□□□□ 0.58
KDELR3O43731 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KDELR3O43731 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms