Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 AC126763.1-201ENST00000552015 2118 ntBASIC13.84□□□□□ -0.19
SNAI2O43623 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.83□□□□□ -0.19
SNAI2O43623 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.83□□□□□ -0.19
SNAI2O43623 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNAI2O43623 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNAI2O43623 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNAI2O43623 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.83□□□□□ -0.2
SNAI2O43623 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SNAI2O43623 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.83□□□□□ -0.2
SNAI2O43623 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.83□□□□□ -0.2
SNAI2O43623 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.83□□□□□ -0.2
SNAI2O43623 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.83□□□□□ -0.2
SNAI2O43623 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 AC105036.2-201ENST00000569468 176 ntBASIC13.83□□□□□ -0.2
SNAI2O43623 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.83□□□□□ -0.2
SNAI2O43623 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.83□□□□□ -0.2
SNAI2O43623 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.83□□□□□ -0.2
SNAI2O43623 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNAI2O43623 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 AC046158.3-201ENST00000624947 2558 ntBASIC13.82□□□□□ -0.2
SNAI2O43623 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNAI2O43623 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.82□□□□□ -0.2
SNAI2O43623 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNAI2O43623 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.82□□□□□ -0.2
SNAI2O43623 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.82□□□□□ -0.2
SNAI2O43623 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SNAI2O43623 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SNAI2O43623 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SNAI2O43623 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.82□□□□□ -0.2
SNAI2O43623 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNAI2O43623 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNAI2O43623 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNAI2O43623 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
SNAI2O43623 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms