Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1O14646 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1O14646 AC138761.1-201ENST00000584393 385 ntBASIC29.82■■■□□ 2.36
CHD1O14646 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC29.81■■■□□ 2.36
CHD1O14646 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC29.81■■■□□ 2.36
CHD1O14646 PAWRP1-201ENST00000451083 565 ntBASIC29.81■■■□□ 2.36
CHD1O14646 AC068472.1-201ENST00000474589 881 ntBASIC29.81■■■□□ 2.36
CHD1O14646 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC29.81■■■□□ 2.36
CHD1O14646 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC29.81■■■□□ 2.36
CHD1O14646 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
CHD1O14646 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC29.81■■■□□ 2.36
CHD1O14646 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD1O14646 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CHD1O14646 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.8■■■□□ 2.36
CHD1O14646 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD1O14646 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
CHD1O14646 RNF34-208ENST00000555076 593 ntTSL 3 BASIC29.8■■■□□ 2.36
CHD1O14646 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC29.8■■■□□ 2.36
CHD1O14646 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC29.79■■■□□ 2.36
CHD1O14646 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CHD1O14646 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC29.79■■■□□ 2.36
CHD1O14646 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC29.79■■■□□ 2.36
CHD1O14646 AC136632.2-201ENST00000512891 861 ntBASIC29.79■■■□□ 2.36
CHD1O14646 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC29.79■■■□□ 2.36
CHD1O14646 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC29.79■■■□□ 2.36
CHD1O14646 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 HEIH-201ENST00000623091 1652 ntBASIC29.79■■■□□ 2.36
CHD1O14646 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CHD1O14646 AC108073.2-201ENST00000464002 357 ntBASIC29.79■■■□□ 2.36
CHD1O14646 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC29.79■■■□□ 2.36
CHD1O14646 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC29.79■■■□□ 2.36
CHD1O14646 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD1O14646 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC29.78■■■□□ 2.36
CHD1O14646 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC29.78■■■□□ 2.36
CHD1O14646 COPE-202ENST00000349893 948 ntTSL 2 BASIC29.78■■■□□ 2.36
CHD1O14646 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC29.78■■■□□ 2.36
CHD1O14646 GPR89P-201ENST00000407924 1495 ntBASIC29.78■■■□□ 2.36
CHD1O14646 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC29.78■■■□□ 2.36
CHD1O14646 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC29.78■■■□□ 2.36
CHD1O14646 KRT18P41-201ENST00000518924 1277 ntBASIC29.78■■■□□ 2.36
CHD1O14646 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHD1O14646 AC006557.2-201ENST00000592985 1240 ntBASIC29.78■■■□□ 2.36
CHD1O14646 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC29.78■■■□□ 2.36
CHD1O14646 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC29.78■■■□□ 2.36
CHD1O14646 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
CHD1O14646 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CHD1O14646 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CHD1O14646 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CHD1O14646 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC29.77■■■□□ 2.36
CHD1O14646 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC29.77■■■□□ 2.36
CHD1O14646 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CHD1O14646 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC29.77■■■□□ 2.36
CHD1O14646 PGM5P2-202ENST00000637225 1043 ntBASIC29.77■■■□□ 2.36
CHD1O14646 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CHD1O14646 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
CHD1O14646 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CHD1O14646 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CHD1O14646 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CHD1O14646 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CHD1O14646 ELK2BP-201ENST00000415014 1224 ntBASIC29.76■■■□□ 2.36
CHD1O14646 LSM12-202ENST00000585388 942 ntTSL 3 BASIC29.76■■■□□ 2.36
CHD1O14646 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CHD1O14646 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
CHD1O14646 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHD1O14646 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CHD1O14646 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHD1O14646 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CHD1O14646 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHD1O14646 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC29.76■■■□□ 2.35
CHD1O14646 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC29.76■■■□□ 2.35
CHD1O14646 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC29.76■■■□□ 2.35
CHD1O14646 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms