Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK1AO00322 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
UPK1AO00322 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UPK1AO00322 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.55■□□□□ 0.4
UPK1AO00322 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UPK1AO00322 AP005242.2-201ENST00000580065 1175 ntBASIC17.55■□□□□ 0.4
UPK1AO00322 AC008622.2-201ENST00000617006 1229 ntBASIC17.55■□□□□ 0.4
UPK1AO00322 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPK1AO00322 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK1AO00322 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK1AO00322 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1AO00322 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UPK1AO00322 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UPK1AO00322 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 KRT17P2-201ENST00000300992 1314 ntBASIC17.54■□□□□ 0.4
UPK1AO00322 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 RCC2P3-201ENST00000418112 1537 ntBASIC17.54■□□□□ 0.4
UPK1AO00322 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.54■□□□□ 0.4
UPK1AO00322 CA15P1-201ENST00000481698 905 ntBASIC17.54■□□□□ 0.4
UPK1AO00322 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
UPK1AO00322 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.54■□□□□ 0.4
UPK1AO00322 MIR4497-201ENST00000583208 89 ntBASIC17.54■□□□□ 0.4
UPK1AO00322 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1AO00322 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
UPK1AO00322 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK1AO00322 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.54■□□□□ 0.4
UPK1AO00322 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK1AO00322 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK1AO00322 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
UPK1AO00322 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
UPK1AO00322 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
UPK1AO00322 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.53■□□□□ 0.4
UPK1AO00322 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 AL355075.4-201ENST00000554988 638 ntBASIC17.53■□□□□ 0.4
UPK1AO00322 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 AP000525.1-201ENST00000608286 694 ntBASIC17.53■□□□□ 0.4
UPK1AO00322 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 AC134043.2-201ENST00000624206 2238 ntBASIC17.53■□□□□ 0.4
UPK1AO00322 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 AL499627.1-201ENST00000569373 2188 ntBASIC17.53■□□□□ 0.4
UPK1AO00322 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UPK1AO00322 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.53■□□□□ 0.4
UPK1AO00322 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK1AO00322 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 AC135776.1-201ENST00000319817 2481 ntBASIC17.53■□□□□ 0.4
UPK1AO00322 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1AO00322 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1AO00322 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK1AO00322 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1AO00322 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1AO00322 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1AO00322 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1AO00322 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms