Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 MYLKP1-201ENST00000509077 1580 ntBASIC17.12■□□□□ 0.33
TNFRSF11BO00300 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF11BO00300 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 AC069152.1-201ENST00000438030 544 ntBASIC17.11■□□□□ 0.33
TNFRSF11BO00300 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF11BO00300 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 RCC2P3-201ENST00000418112 1537 ntBASIC17.1■□□□□ 0.33
TNFRSF11BO00300 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF11BO00300 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms