Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRRM3A6NNA2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.14■□□□□ 0.66
SRRM3A6NNA2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.14■□□□□ 0.65
SRRM3A6NNA2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AL390719.1-204ENST00000412397 1219 ntBASIC19.14■□□□□ 0.65
SRRM3A6NNA2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AC063952.2-201ENST00000498792 1227 ntBASIC19.14■□□□□ 0.65
SRRM3A6NNA2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AP000550.4-202ENST00000639755 178 ntBASIC19.14■□□□□ 0.65
SRRM3A6NNA2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.14■□□□□ 0.65
SRRM3A6NNA2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 HLA-G-202ENST00000376815 851 ntBASIC19.13■□□□□ 0.65
SRRM3A6NNA2 HLA-G-203ENST00000376818 1127 ntBASIC19.13■□□□□ 0.65
SRRM3A6NNA2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms