Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 LINC01238-205ENST00000567549 1107 ntBASIC14.58□□□□□ -0.08
LINC01548A6NM66 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.58□□□□□ -0.08
LINC01548A6NM66 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 WIZP1-201ENST00000531444 2299 ntBASIC14.58□□□□□ -0.08
LINC01548A6NM66 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AC112777.1-201ENST00000540175 1423 ntBASIC14.58□□□□□ -0.08
LINC01548A6NM66 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 AL163051.1-201ENST00000569214 1512 ntBASIC14.57□□□□□ -0.08
LINC01548A6NM66 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 AL671277.2-201ENST00000458060 996 ntBASIC14.57□□□□□ -0.08
LINC01548A6NM66 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01548A6NM66 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01548A6NM66 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 AC034232.1-201ENST00000506026 1064 ntBASIC14.56□□□□□ -0.08
LINC01548A6NM66 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 LINC01311-201ENST00000565162 1445 ntBASIC14.56□□□□□ -0.08
LINC01548A6NM66 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 AC104581.1-202ENST00000635932 2618 ntBASIC14.56□□□□□ -0.08
LINC01548A6NM66 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01548A6NM66 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01548A6NM66 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
LINC01548A6NM66 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01548A6NM66 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms