Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AC098818.2-201ENST00000564925 2320 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AL121956.5-201ENST00000625261 221 ntBASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DNMT3AQ9Y6K1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 ARMC10P1-201ENST00000313754 855 ntBASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 HBZP1-201ENST00000354915 429 ntBASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 HLA-F-220ENST00000434407 884 ntBASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 AC087388.1-201ENST00000571370 1112 ntBASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 LINC01311-201ENST00000565162 1445 ntBASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DNMT3AQ9Y6K1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 AC009102.3-201ENST00000623118 1491 ntBASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.1■□□□□ 0.49
DNMT3AQ9Y6K1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms