Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 REXO1L9P-201ENST00000604264 2108 ntBASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAPPC1Q9Y5R8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 LINC01126-201ENST00000623515 1646 ntBASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AC093677.2-201ENST00000600169 1863 ntBASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AL356740.2-201ENST00000601559 647 ntBASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
TRAPPC1Q9Y5R8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAPPC1Q9Y5R8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms