Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC104390.1-201ENST00000555663 520 ntBASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 AL441883.1-201ENST00000566170 1045 ntBASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 LINC01238-205ENST00000567549 1107 ntBASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 MYLKP1-201ENST00000509077 1580 ntBASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAI2Q9Y5P3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.71■□□□□ 0.58
RAI2Q9Y5P3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RAI2Q9Y5P3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 WIZP1-201ENST00000531444 2299 ntBASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 AC126763.1-201ENST00000552015 2118 ntBASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAI2Q9Y5P3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAI2Q9Y5P3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms