Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.08■□□□□ 0.33
HRH3Q9Y5N1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 AL512604.3-201ENST00000569583 964 ntBASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
HRH3Q9Y5N1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 PCED1CP-201ENST00000419887 785 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AP000550.4-202ENST00000639755 178 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AC083906.6-201ENST00000641366 219 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AC138932.1-201ENST00000534164 6830 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 AL109659.2-201ENST00000606809 1674 ntBASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HRH3Q9Y5N1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 HOMER2P1-201ENST00000455653 964 ntBASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HRH3Q9Y5N1 MIR3180-5-201ENST00000583743 153 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms