Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TPM4P1-201ENST00000436100 807 ntBASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTDP1Q9Y5B0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 Z83836.1-201ENST00000624605 1642 ntBASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 RNF126P1-202ENST00000569893 925 ntBASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 HEIH-201ENST00000623091 1652 ntBASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTDP1Q9Y5B0 AL357033.4-201ENST00000617703 1807 ntBASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.36■■□□□ 1.01
CTDP1Q9Y5B0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTDP1Q9Y5B0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms