Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 AC008556.1-201ENST00000610908 2040 ntBASIC17.51■□□□□ 0.39
AP4S1Q9Y587 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 AC011767.1-201ENST00000617410 1153 ntBASIC17.51■□□□□ 0.39
AP4S1Q9Y587 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
AP4S1Q9Y587 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 AC006557.6-201ENST00000623071 864 ntBASIC17.5■□□□□ 0.39
AP4S1Q9Y587 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.5■□□□□ 0.39
AP4S1Q9Y587 PP12613-201ENST00000424958 2230 ntBASIC17.49■□□□□ 0.39
AP4S1Q9Y587 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 KRT8P45-201ENST00000414328 1447 ntBASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4S1Q9Y587 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 AC231657.2-201ENST00000624556 255 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms