Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2D4Q9Y2X8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 NCF1B-203ENST00000435988 1254 ntBASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
UBE2D4Q9Y2X8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.9□□□□□ -0.35
UBE2D4Q9Y2X8 MYLKP1-201ENST00000509077 1580 ntBASIC12.9□□□□□ -0.35
UBE2D4Q9Y2X8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.9□□□□□ -0.35
UBE2D4Q9Y2X8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.9□□□□□ -0.35
UBE2D4Q9Y2X8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UBE2D4Q9Y2X8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 FLJ13224-201ENST00000313737 1514 ntBASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2D4Q9Y2X8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2D4Q9Y2X8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms