Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 POM121L3P-201ENST00000419331 1163 ntBASIC24.15■■□□□ 1.46
SPG7Q9UQ90 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
SPG7Q9UQ90 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
SPG7Q9UQ90 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SPG7Q9UQ90 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SPG7Q9UQ90 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SPG7Q9UQ90 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 HLA-A-201ENST00000376802 1334 ntBASIC24.13■■□□□ 1.45
SPG7Q9UQ90 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 AF238378.1-201ENST00000526806 358 ntBASIC24.13■■□□□ 1.45
SPG7Q9UQ90 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SPG7Q9UQ90 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SPG7Q9UQ90 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 MIR149-201ENST00000384879 89 ntBASIC24.11■■□□□ 1.45
SPG7Q9UQ90 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.11■■□□□ 1.45
SPG7Q9UQ90 AC093484.2-201ENST00000580996 2166 ntBASIC24.1■■□□□ 1.45
SPG7Q9UQ90 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms