Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 C1QBPP2-201ENST00000528754 825 ntBASIC21.22■□□□□ 0.99
USP25Q9UHP3 RARRES2P10-201ENST00000564312 460 ntBASIC21.22■□□□□ 0.99
USP25Q9UHP3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 AC068587.9-201ENST00000641814 219 ntBASIC21.22■□□□□ 0.99
USP25Q9UHP3 AL031985.4-201ENST00000642138 673 ntBASIC21.22■□□□□ 0.99
USP25Q9UHP3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
USP25Q9UHP3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 AC009053.2-201ENST00000563701 2365 ntBASIC21.22■□□□□ 0.99
USP25Q9UHP3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP25Q9UHP3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 AC134043.2-201ENST00000624206 2238 ntBASIC21.21■□□□□ 0.99
USP25Q9UHP3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 KRT8P32-201ENST00000512863 1461 ntBASIC21.21■□□□□ 0.99
USP25Q9UHP3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 RPPH1-201ENST00000516869 333 ntBASIC21.21■□□□□ 0.99
USP25Q9UHP3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP25Q9UHP3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP25Q9UHP3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
USP25Q9UHP3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
USP25Q9UHP3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.2■□□□□ 0.98
USP25Q9UHP3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP25Q9UHP3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.2■□□□□ 0.98
USP25Q9UHP3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.19■□□□□ 0.98
USP25Q9UHP3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 PRORSD1P-202ENST00000563365 2154 ntBASIC21.19■□□□□ 0.98
USP25Q9UHP3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 AC073195.1-201ENST00000607241 877 ntBASIC21.19■□□□□ 0.98
USP25Q9UHP3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.19■□□□□ 0.98
USP25Q9UHP3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP25Q9UHP3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms