Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 AC093536.2-201ENST00000565257 1406 ntBASIC21.34■■□□□ 1.01
RNF216Q9NWF9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF216Q9NWF9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 RFESDP1-201ENST00000422350 461 ntBASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AL390955.1-201ENST00000428694 934 ntBASIC21.33■■□□□ 1.01
RNF216Q9NWF9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AC009245.1-201ENST00000456481 862 ntBASIC21.33■■□□□ 1.01
RNF216Q9NWF9 B3GAT3P1-201ENST00000471720 806 ntBASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF216Q9NWF9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF216Q9NWF9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF216Q9NWF9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.33■■□□□ 1
RNF216Q9NWF9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.33■■□□□ 1
RNF216Q9NWF9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF216Q9NWF9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF216Q9NWF9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF216Q9NWF9 CYP2D8P-201ENST00000433633 1490 ntBASIC21.32■■□□□ 1
RNF216Q9NWF9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 TERF1P1-201ENST00000311003 1181 ntBASIC21.32■■□□□ 1
RNF216Q9NWF9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.32■■□□□ 1
RNF216Q9NWF9 AC069277.2-201ENST00000454211 432 ntBASIC21.32■■□□□ 1
RNF216Q9NWF9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.32■■□□□ 1
RNF216Q9NWF9 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC21.32■■□□□ 1
RNF216Q9NWF9 NREP-217ENST00000509025 987 ntTSL 3 BASIC21.32■■□□□ 1
RNF216Q9NWF9 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 AC007620.3-201ENST00000608131 497 ntBASIC21.32■■□□□ 1
RNF216Q9NWF9 AC122108.2-201ENST00000611946 526 ntBASIC21.32■■□□□ 1
RNF216Q9NWF9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RNF216Q9NWF9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.32■■□□□ 1
RNF216Q9NWF9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF216Q9NWF9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF216Q9NWF9 AL513185.3-201ENST00000433335 1300 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RNF216Q9NWF9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.31■■□□□ 1
RNF216Q9NWF9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RNF216Q9NWF9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms