Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.25■□□□□ 0.35
CTPS2Q9NRF8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTPS2Q9NRF8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 REXO1L10P-201ENST00000615707 1290 ntBASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 REXO1L12P-201ENST00000622156 912 ntBASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 AC068587.9-201ENST00000641814 219 ntBASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CTPS2Q9NRF8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 SNORA78-201ENST00000459373 127 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms