Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTN4Q9NQC3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTN4Q9NQC3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RTN4Q9NQC3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RTN4Q9NQC3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 Z98044.1-201ENST00000632503 1764 ntBASIC21.8■■□□□ 1.08
RTN4Q9NQC3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTN4Q9NQC3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 NTF6G-201ENST00000591094 616 ntBASIC21.79■■□□□ 1.08
RTN4Q9NQC3 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC21.79■■□□□ 1.08
RTN4Q9NQC3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 GNAS-203ENST00000306120 1878 ntBASIC21.79■■□□□ 1.08
RTN4Q9NQC3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTN4Q9NQC3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms