Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 AL109659.2-201ENST00000606809 1674 ntBASIC16.5■□□□□ 0.23
NELFAQ9H3P2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 AL023284.2-201ENST00000405850 579 ntBASIC16.5■□□□□ 0.23
NELFAQ9H3P2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.5■□□□□ 0.23
NELFAQ9H3P2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NELFAQ9H3P2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 HMGA1P5-201ENST00000412453 271 ntBASIC16.49■□□□□ 0.23
NELFAQ9H3P2 AC113347.1-201ENST00000413321 391 ntBASIC16.49■□□□□ 0.23
NELFAQ9H3P2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.49■□□□□ 0.23
NELFAQ9H3P2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 MYC-208ENST00000641036 567 ntBASIC16.49■□□□□ 0.23
NELFAQ9H3P2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NELFAQ9H3P2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 AL357033.4-201ENST00000617703 1807 ntBASIC16.48■□□□□ 0.23
NELFAQ9H3P2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 MCCD1P1-208ENST00000445732 328 ntBASIC16.48■□□□□ 0.23
NELFAQ9H3P2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 AC010203.1-204ENST00000548782 407 ntBASIC16.48■□□□□ 0.23
NELFAQ9H3P2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 PKD1P1-201ENST00000458669 6805 ntBASIC16.48■□□□□ 0.23
NELFAQ9H3P2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NELFAQ9H3P2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms