Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC105020.6-201ENST00000621523 1217 ntBASIC17.65■□□□□ 0.42
VCX3BQ9H321 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.64■□□□□ 0.42
VCX3BQ9H321 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.64■□□□□ 0.42
VCX3BQ9H321 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VCX3BQ9H321 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VCX3BQ9H321 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
VCX3BQ9H321 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VCX3BQ9H321 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3BQ9H321 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 UNC93B3-201ENST00000308076 687 ntBASIC17.63■□□□□ 0.41
VCX3BQ9H321 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 MCRIP2P1-201ENST00000394346 511 ntBASIC17.63■□□□□ 0.41
VCX3BQ9H321 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 AC024257.2-201ENST00000549699 147 ntBASIC17.63■□□□□ 0.41
VCX3BQ9H321 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCX3BQ9H321 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3BQ9H321 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms