Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.15
VPS33BQ9H267 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 AC009102.3-201ENST00000623118 1491 ntBASIC22.2■■□□□ 1.14
VPS33BQ9H267 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS33BQ9H267 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS33BQ9H267 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 AC125634.1-201ENST00000438758 1403 ntBASIC22.19■■□□□ 1.14
VPS33BQ9H267 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
VPS33BQ9H267 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS33BQ9H267 AL137060.1-201ENST00000618151 2648 ntBASIC22.18■■□□□ 1.14
VPS33BQ9H267 AC112907.3-201ENST00000577781 2400 ntBASIC22.18■■□□□ 1.14
VPS33BQ9H267 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
VPS33BQ9H267 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 UPF3AP3-201ENST00000420996 769 ntBASIC22.18■■□□□ 1.14
VPS33BQ9H267 MTCL1P1-201ENST00000446207 792 ntBASIC22.18■■□□□ 1.14
VPS33BQ9H267 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.18■■□□□ 1.14
VPS33BQ9H267 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.18■■□□□ 1.14
VPS33BQ9H267 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.18■■□□□ 1.14
VPS33BQ9H267 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VPS33BQ9H267 HLA-J-201ENST00000462773 1622 ntBASIC22.17■■□□□ 1.14
VPS33BQ9H267 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 AC104109.2-201ENST00000602919 1418 ntBASIC22.17■■□□□ 1.14
VPS33BQ9H267 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 AC034105.1-201ENST00000563488 319 ntBASIC22.17■■□□□ 1.14
VPS33BQ9H267 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS33BQ9H267 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS33BQ9H267 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms